Download MendeleyCrystal structure of uncharacterized conserved protein from Thermotoga maritima
Ebihara, A., Fujimoto, Y., Kagawa, W., Fujikawa, N., Yokoyama, S., Kuramitsu, S.To be published.
2ZBU
Crystal structure of uncharacterized conserved protein from Thermotoga maritima
- PDB DOI: https://doi.org/10.2210/pdb2ZBU/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Thermotoga maritima MSB8
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2007-10-30 Released: 2007-11-13
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 ?
- R-Value Free: 0.257
- R-Value Work: 0.222
- R-Value Observed: 0.222
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Uncharacterized conserved protein | 263 | Thermotoga maritima MSB8 | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for Q9WZC8 (Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)) Explore Q9WZC8 Go to UniProtKB: Q9WZC8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9WZC8 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ADN Query on ADN | E [auth A], F [auth B], G [auth C], H [auth D] | ADENOSINE C10 H13 N5 O4 OIRDTQYFTABQOQ-KQYNXXCUSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 ?
- R-Value Free: 0.257
- R-Value Work: 0.222
- R-Value Observed: 0.222
- Space Group: H 3
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 120.476 | ¦Á = 90 |
| b = 120.476 | ¦Â = 90 |
| c = 227.115 | ¦Ă = 120 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| SOLVE | phasing |
Entry History
Deposition Data
- Released Date: 2007-11-13 Deposition Author(s): Ebihara, A., Fujimoto, Y., Kagawa, W., Fujikawa, N., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Revision History (Full details and data files)
- Version 1.0: 2007-11-13
Type: Initial release - Version 1.1: 2011-07-13
Changes: Source and taxonomy, Version format compliance - Version 1.2: 2017-10-11
Changes: Refinement description - Version 1.3: 2024-10-23
Changes: Data collection, Database references, Derived calculations, Structure summary
