Download MendeleyCrystal Structure of peptidyl-tRNA hydrolase from Mycobacterium smegmatis at 2.2 A resolution
Kumar, A., Singh, A., Yadav, R., Sinha, M., Arora, A., Sharma, S., Singh, T.P.To be published.
3P2J
Crystal structure of peptidyl-tRNA hydrolase from Mycobacterium smegmatis at 2.2 A resolution
- PDB DOI: https://doi.org/10.2210/pdb3P2J/pdb
- Classification: HYDROLASE
- Organism(s): Mycolicibacterium smegmatis MC2 155
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2010-10-02 Released: 2010-11-17
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.22 ?
- R-Value Free: 0.218
- R-Value Work: 0.192
- R-Value Observed: 0.193
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Peptidyl-tRNA hydrolase | 191 | Mycolicibacterium smegmatis MC2 155 | Mutation(s): 0 EC: 3.1.1.29 |  | |
UniProt | |||||
Find proteins for A0R3D3 (Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)) Explore A0R3D3 Go to UniProtKB: A0R3D3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0R3D3 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.22 ?
- R-Value Free: 0.218
- R-Value Work: 0.192
- R-Value Observed: 0.193
- Space Group: P 21 21 21
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 44.909 | α = 90 |
| b = 58.943 | β = 90 |
| c = 61.854 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| AMoRE | phasing |
| REFMAC | refinement |
| SCALEPACK | data scaling |
Entry History
Deposition Data
- Released Date: 2010-11-17 Deposition Author(s): Kumar, A., Singh, A., Yadav, R., Sinha, M., Arora, A., Sharma, S., Singh, T.P.
Revision History (Full details and data files)
- Version 1.0: 2010-11-17
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2023-11-01
Changes: Data collection, Database references, Refinement description
