Download MendeleyCrystal structure of a Hypothetical aminotransferase (NCgl2491) from CORYNEBACTERIUM GLUTAMICUM ATCC 13032 KITASATO at 1.60 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
3SNO
Crystal structure of a putative aminotransferase (NCgl2491) from Corynebacterium glutamicum ATCC 13032 at 1.60 A resolution
- PDB DOI: https://doi.org/10.2210/pdb3SNO/pdb
- Classification: TRANSFERASE
- Organism(s): Corynebacterium glutamicum ATCC 13032
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2011-06-29 Released: 2011-07-20
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 ?
- R-Value Free: 0.253
- R-Value Work: 0.231
- R-Value Observed: 0.232
wwPDB Validation 3D Report Full Report
This is version 1.5 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical aminotransferase | 315 | Corynebacterium glutamicum ATCC 13032 | Mutation(s): 0 Gene Names: Cgl2580 EC: 2.6.1.42 |  | |
UniProt | |||||
Find proteins for Q8NMJ3 (Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)) Explore Q8NMJ3 Go to UniProtKB: Q8NMJ3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8NMJ3 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | B [auth A], C [auth A], D [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 ?
- R-Value Free: 0.253
- R-Value Work: 0.231
- R-Value Observed: 0.232
- Space Group: C 1 2 1
- Diffraction Data: https://doi.org/10.18430/M33SNO
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 139.899 | ¦Á = 90 |
| b = 52.586 | ¦Â = 98.92 |
| c = 37.35 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| MolProbity | model building |
| PDB_EXTRACT | data extraction |
| SHELX | phasing |
| SHARP | phasing |
| XSCALE | data scaling |
| BUSTER-TNT | refinement |
| XDS | data reduction |
| SHELXD | phasing |
| BUSTER | refinement |
Entry History
Deposition Data
- Released Date: 2011-07-20 Deposition Author(s): Joint Center for Structural Genomics (JCSG)
Revision History (Full details and data files)
- Version 1.0: 2011-07-20
Type: Initial release - Version 1.1: 2014-12-24
Changes: Structure summary - Version 1.2: 2017-10-25
Changes: Author supporting evidence, Refinement description - Version 1.3: 2018-01-24
Changes: Database references - Version 1.4: 2023-02-01
Changes: Database references, Derived calculations - Version 1.5: 2024-10-30
Changes: Data collection, Structure summary
