Download MendeleyStructural Snapshots of Glmu from Mycobacterium Tuberculosis
Jagtap, P.A., Verma, S.K., Prakash, B.To be published.
4G3S
Crystal structure of GlmU from Mycobacterium tuberculosis in complex with uridine-diphosphate-n-acetylglucosamine and pyrophosphate Snapshot 2
- PDB DOI: https://doi.org/10.2210/pdb4G3S/pdb
- Classification: TRANSFERASE
- Organism(s): Mycobacterium tuberculosis
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2012-07-15 Released: 2013-08-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.04 ?
- R-Value Free: 0.230
- R-Value Work: 0.180
- R-Value Observed: 0.181
Starting Model: experimental
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This is version 2.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Bifunctional protein GlmU | 501 | Mycobacterium tuberculosis | Mutation(s): 0 Gene Names: glmU, MT1046, Rv1018c EC: 2.7.7.23 (PDB Primary Data), 2.3.1.157 (PDB Primary Data) |  | |
UniProt | |||||
Find proteins for P9WMN3 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WMN3 Go to UniProtKB: P9WMN3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P9WMN3 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 5 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| UD1 Query on UD1 | B [auth A] | URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE C17 H27 N3 O17 P2 LFTYTUAZOPRMMI-CFRASDGPSA-N |  | ||
| GN1 Query on GN1 | C [auth A] | 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-glucopyranose C8 H16 N O9 P FZLJPEPAYPUMMR-FMDGEEDCSA-N |  | ||
| POP Query on POP | D [auth A] | PYROPHOSPHATE 2- H2 O7 P2 XPPKVPWEQAFLFU-UHFFFAOYSA-L |  | ||
| CO Query on CO | G [auth A], H [auth A] | COBALT (II) ION Co XLJKHNWPARRRJB-UHFFFAOYSA-N |  | ||
| MG Query on MG | E [auth A], F [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.04 ?
- R-Value Free: 0.230
- R-Value Work: 0.180
- R-Value Observed: 0.181
- Space Group: H 3
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 76.58 | α = 90 |
| b = 76.58 | β = 90 |
| c = 276.97 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XSCALE | data scaling |
Entry History
Deposition Data
- Released Date: 2013-08-07 Deposition Author(s): Jagtap, P.A., Verma, S.K., Prakash, B.
Revision History (Full details and data files)
- Version 1.0: 2013-08-07
Type: Initial release - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Atomic model, Data collection, Database references, Derived calculations, Structure summary - Version 2.1: 2023-11-08
Changes: Data collection, Database references, Refinement description, Structure summary
