Download MendeleyCrystal Structure of the Inosine 5'-monophosphate Dehydrogenase, with a Short Internal Deletion of CBS Domain from Bacillus anthracis str. Ames
Kim, Y., Makowska-Grzyska, M., Gu, M., Anderson, W.F., Joachimiak, A.To be published.
4MJM
Crystal Structure of the Inosine 5'-monophosphate Dehydrogenase, with a Short Internal Deletion of CBS Domain from Bacillus anthracis str. Ames
- PDB DOI: https://doi.org/10.2210/pdb4MJM/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Bacillus anthracis str. Ames
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2013-09-03 Released: 2013-10-09
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.25 ?
- R-Value Free: 0.232
- R-Value Work: 0.206
- R-Value Observed: 0.209
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Inosine-5'-monophosphate dehydrogenase | 385 | Bacillus anthracis str. Ames | Mutation(s): 0 Gene Names: guaB, BA_0008, BAS0011, GBAA_0008 EC: 1.1.1.205 |  | |
UniProt | |||||
Find proteins for A0A6L8P2U9 (Bacillus anthracis) Explore A0A6L8P2U9 Go to UniProtKB: A0A6L8P2U9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A6L8P2U9 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| EDO Query on EDO | E [auth A] F [auth A] G [auth A] H [auth B] I [auth C] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.25 ?
- R-Value Free: 0.232
- R-Value Work: 0.206
- R-Value Observed: 0.209
- Space Group: P 1
- Diffraction Data: https://doi.org/10.18430/m34mjm
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 84.328 | ¦Á = 110.01 |
| b = 84.249 | ¦Â = 109.22 |
| c = 84.313 | ¦Ă = 109.19 |
| Software Name | Purpose |
|---|---|
| SBC-Collect | data collection |
| HKL-3000 | data collection |
| HKL-3000 | phasing |
| MOLREP | phasing |
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
Entry History
Deposition Data
- Released Date: 2013-10-09 Deposition Author(s): Kim, Y., Makowska-Grzyska, M., Gu, M., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
Revision History (Full details and data files)
- Version 1.0: 2013-10-09
Type: Initial release - Version 1.1: 2017-08-02
Changes: Refinement description, Source and taxonomy - Version 1.2: 2023-09-20
Changes: Data collection, Database references, Derived calculations, Refinement description
