Download MendeleyStructure of coniferyl alcohol bound monolignol 4-O-methyltransferase 9 at 1.73 Angstroms resolution
Cai, Y., Liu, C.-J.To be published.
5CVV
coniferyl alcohol bound monolignol 4-O-methyltransferase 9
- PDB DOI: https://doi.org/10.2210/pdb5CVV/pdb
- Classification: TRANSFERASE
- Organism(s): Clarkia breweri
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2015-07-27 Released: 2015-09-16
- Funding Organization(s): Department of Energy (DOE, United States)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.73 ?
- R-Value Free: 0.212
- R-Value Work: 0.181
- R-Value Observed: 0.183
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| (Iso)eugenol O-methyltransferase | 368 | Clarkia breweri | Mutation(s): 9 Gene Names: IEMT1 EC: 2.1.1.146 |  | |
UniProt | |||||
Find proteins for O04385 (Clarkia breweri) Explore O04385 Go to UniProtKB: O04385 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O04385 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SAH Query on SAH | C [auth A], E [auth B] | S-ADENOSYL-L-HOMOCYSTEINE C14 H20 N6 O5 S ZJUKTBDSGOFHSH-WFMPWKQPSA-N |  | ||
| N7I Query on N7I | D [auth A] | 4-[(1E)-3-hydroxyprop-1-en-1-yl]-2-methoxyphenol C10 H12 O3 JMFRWRFFLBVWSI-NSCUHMNNSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.73 ?
- R-Value Free: 0.212
- R-Value Work: 0.181
- R-Value Observed: 0.183
- Space Group: P 1 21 1
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 68.29 | ¦Á = 90 |
| b = 67.48 | ¦Â = 93.18 |
| c = 74.07 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| iMOSFLM | data reduction |
| SCALA | data scaling |
| MOLREP | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2015-09-16 Deposition Author(s): Cai, Y., Liu, C.-J.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Department of Energy (DOE, United States) | United States | DEAC0298CH10886 |
Revision History (Full details and data files)
- Version 1.0: 2015-09-16
Type: Initial release - Version 1.1: 2017-09-20
Changes: Author supporting evidence, Derived calculations - Version 1.2: 2019-12-04
Changes: Author supporting evidence - Version 1.3: 2024-03-06
Changes: Data collection, Database references
