Download MendeleyCrystal Structure of the Legionella Effector protein MavL
Cygler, M., Voth, K.To be published.
6OMI
Crystal structure of the Legionella effector protein MavL
- PDB DOI: https://doi.org/10.2210/pdb6OMI/pdb
- Classification: HYDROLASE
- Organism(s): Legionella pneumophila subsp. pneumophila str. Philadelphia 1
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2019-04-18 Released: 2020-02-26
- Funding Organization(s): Canadian Institutes of Health Research (CIHR)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.64 ?
- R-Value Free: 0.253 (Depositor), 0.255 (DCC)
- R-Value Work: 0.211 (Depositor), 0.216 (DCC)
- R-Value Observed: 0.213 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| MavL | 396 | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 | Mutation(s): 0 Gene Names: lpg2526 |  | |
UniProt | |||||
Find proteins for Q5ZSJ1 (Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)) Explore Q5ZSJ1 Go to UniProtKB: Q5ZSJ1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5ZSJ1 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| BR Query on BR | D [auth A], E [auth C] | BROMIDE ION Br CPELXLSAUQHCOX-UHFFFAOYSA-M |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.64 ?
- R-Value Free: 0.253 (Depositor), 0.255 (DCC)
- R-Value Work: 0.211 (Depositor), 0.216 (DCC)
- R-Value Observed: 0.213 (Depositor)
Space Group: C 1 2 1
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 97.619 | ¦Á = 90 |
| b = 138.009 | ¦Â = 92.23 |
| c = 108.523 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| XDS | data scaling |
| PHENIX | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2020-02-26 Deposition Author(s): Cygler, M., Voth, K.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Canadian Institutes of Health Research (CIHR) | Canada | 412613 |
Revision History (Full details and data files)
- Version 1.0: 2020-02-26
Type: Initial release - Version 1.1: 2024-10-30
Changes: Data collection, Database references, Refinement description, Structure summary
