Download MendeleyEclA C-terminal domain; sugar-binding protein
Koehnke, J., Sikandar, A.To be published.
6YF6
EclA C-terminal domain; sugar-binding protein
- PDB DOI: https://doi.org/10.2210/pdb6YF6/pdb
- Classification: SUGAR BINDING PROTEIN
- Organism(s): Enterobacter cloacae subsp. cloacae ATCC 13047
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2020-03-26 Released: 2021-04-07
- Funding Organization(s): German Research Foundation (DFG)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 ?
- R-Value Free: 0.237
- R-Value Work: 0.190
- R-Value Observed: 0.192
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Galactose-binding lectin | 144 | Enterobacter cloacae subsp. cloacae ATCC 13047 | Mutation(s): 0 Gene Names: ECL_04191 |  | |
UniProt | |||||
Find proteins for A0A0H3CQ33 (Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)) Explore A0A0H3CQ33 Go to UniProtKB: A0A0H3CQ33 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0H3CQ33 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| SFU Query on SFU | C [auth A], E [auth B] | methyl 1-seleno-alpha-L-fucopyranoside C7 H14 O4 Se VHTNTJQSKJZERS-XUVCUMPTSA-N |  | ||
| PO4 Query on PO4 | F [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | ||
| CA Query on CA | D [auth A], G [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 ?
- R-Value Free: 0.237
- R-Value Work: 0.190
- R-Value Observed: 0.192
- Space Group: P 21 21 21
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 38.512 | ¦Á = 90 |
| b = 63.671 | ¦Â = 90 |
| c = 134.009 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| Aimless | refinement |
| PHENIX | refinement |
| xia2 | data reduction |
| Aimless | data scaling |
| AutoSol | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2021-04-07 Deposition Author(s): Koehnke, J., Sikandar, A.
| Funding Organization | Location | Grant Number |
|---|---|---|
| German Research Foundation (DFG) | Germany | KO4116_3_1 |
Revision History (Full details and data files)
- Version 1.0: 2021-04-07
Type: Initial release - Version 1.1: 2024-05-15
Changes: Data collection, Database references
