Download MendeleyCrystal structure of Paradendryphiella salina PL7A alginate lyase
Wilkens, C., Fredslund, F., Welner, D.H.To be published.
6YWF
Crystal structure of Paradendryphiella salina PL7A alginate lyase
- PDB DOI: https://doi.org/10.2210/pdb6YWF/pdb
- Classification: LYASE
- Organism(s): Paradendryphiella salina
- Expression System: Komagataella pastoris
- Mutation(s): No
- Deposited: 2020-04-29 Released: 2021-05-12
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 ?
- R-Value Free: 0.188
- R-Value Work: 0.151
- R-Value Observed: 0.154
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Alginate lyase (PL7) | 231 | Paradendryphiella salina | Mutation(s): 0 Gene Names: PsAlg7A |  | |
UniProt | |||||
Find proteins for A0A485PVH1 (Paradendryphiella salina) Explore A0A485PVH1 Go to UniProtKB: A0A485PVH1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A485PVH1 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 ?
- R-Value Free: 0.188
- R-Value Work: 0.151
- R-Value Observed: 0.154
- Space Group: P 21 21 21
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 34.768 | α = 90 |
| b = 80.442 | β = 90 |
| c = 81.375 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2021-05-12 Deposition Author(s): Wilkens, C., Fredslund, F., Welner, D.H.
Revision History (Full details and data files)
- Version 1.0: 2021-05-12
Type: Initial release - Version 1.1: 2024-01-24
Changes: Data collection, Database references, Refinement description - Version 1.2: 2024-10-09
Changes: Structure summary
