Crystal Structure of the Monomeric Extracellular Domain of alpha 9 Nicotinic Receptor Subunit in Complex With alpha-Conotoxin RgIA: Molecular Dynamics Insights Into RgIA Binding to alpha 9 alpha 10 Nicotinic Receptors.
Zouridakis, M., Papakyriakou, A., Ivanov, I.A., Kasheverov, I.E., Tsetlin, V., Tzartos, S., Giastas, P.(2019) Front Pharmacol 10: 474-474
- PubMed: 31118896 
- DOI: https://doi.org/10.3389/fphar.2019.00474
- Primary Citation of Related Structures:  
6HY7 - PubMed Abstract: 
The ¦Á9 subunit of nicotinic acetylcholine receptors (nAChRs) exists mainly in heteropentameric assemblies with ¦Á10. Accumulating data indicate the presence of three different binding sites in ¦Á9¦Á10 nAChRs: the ¦Á9(+)/¦Á9(-), the ¦Á9(+)/¦Á10(-), and the ¦Á10(+)/¦Á9(-). The major role of the principal (+) side of the extracellular domain (ECD) of ¦Á9 subunit in binding of the antagonists methyllylcaconitine and ¦Á-bungarotoxin was shown previously by the crystal structures of the monomeric ¦Á9-ECD with these molecules. Here we present the 2.26-? resolution crystal structure of ¦Á9-ECD in complex with ¦Á-conotoxin (¦Á-Ctx) RgIA, a potential drug for chronic pain, the first structure reported for a complex between an nAChR domain and an ¦Á-Ctx. Superposition of this structure with those of other ¦Á-Ctxs bound to the homologous pentameric acetylcholine binding proteins revealed significant similarities in the orientation of bound conotoxins, despite the monomeric state of the ¦Á9-ECD. In addition, ligand-binding studies calculated a binding affinity of RgIA to the ¦Á9-ECD at the low micromolar range. Given the high identity between ¦Á9 and ¦Á10 ECDs, particularly at their (+) sides, the presented structure was used as template for molecular dynamics simulations of the ECDs of the human ¦Á9¦Á10 nAChR in pentameric assemblies. Our results support a favorable binding of RgIA at ¦Á9(+)/¦Á9(-) or ¦Á10(+)/¦Á9(-) rather than the ¦Á9(+)/¦Á10(-) interface, in accordance with previous mutational and functional data.
Organizational Affiliation: 
Department of Neurobiology, Hellenic Pasteur Institute, Athens, Greece.