Download MendeleyThe sturecture of Legionella effector protein MavL with ADPR
Ouyang, S., Hongxin, G.To be published.
8IPW
The sturecture of Legionella effector protein MavL with ADPR
- PDB DOI: https://doi.org/10.2210/pdb8IPW/pdb
- Classification: PROTEIN BINDING
- Organism(s): Legionella pneumophila
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2023-03-15 Released: 2024-03-20
- Funding Organization(s): National Natural Science Foundation of China (NSFC)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 ?
- R-Value Free: 0.257 (Depositor), 0.260 (DCC)
- R-Value Work: 0.209 (Depositor), 0.220 (DCC)
- R-Value Observed: 0.213 (Depositor)
Starting Model: experimental
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This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| MavL | 363 | Legionella pneumophila | Mutation(s): 0 Gene Names: C3927_12725 |  | |
UniProt | |||||
Find proteins for Q5ZSJ1 (Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)) Explore Q5ZSJ1 Go to UniProtKB: Q5ZSJ1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5ZSJ1 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| AR6 (Subject of Investigation/LOI) Query on AR6 | C [auth A], D [auth B] | [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL[HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE C15 H23 N5 O14 P2 SRNWOUGRCWSEMX-ZQSHOCFMSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.35 ?
- R-Value Free: 0.257 (Depositor), 0.260 (DCC)
- R-Value Work: 0.209 (Depositor), 0.220 (DCC)
- R-Value Observed: 0.213 (Depositor)
Space Group: P 21 21 21
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 50.79 | ¦Á = 90 |
| b = 108.32 | ¦Â = 90 |
| c = 129.78 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| BUSTER | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| PHENIX | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-03-20 Deposition Author(s): Ouyang, S., Hongxin, G.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Natural Science Foundation of China (NSFC) | China | 82172287 |
Revision History (Full details and data files)
- Version 1.0: 2024-03-20
Type: Initial release
