Download MendeleyFull-length LpMIP mutant Y16F
Whittaker, J.J., Guskov, A.To be published.
8R39
Full-length LpMIP mutant Y16F
- PDB DOI: https://doi.org/10.2210/pdb8R39/pdb
- Classification: STRUCTURAL PROTEIN
- Organism(s): Legionella pneumophila
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2023-11-08 Released: 2024-11-20
- Funding Organization(s): German Research Foundation (DFG)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 ?
- R-Value Free: 0.271
- R-Value Work: 0.218
- R-Value Observed: 0.220
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Peptidyl-prolyl cis-trans isomerase | A [auth C] | 208 | Legionella pneumophila | Mutation(s): 1 Gene Names: C3927_03235 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MES Query on MES | D [auth C] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N |  | ||
| PEG Query on PEG | E [auth C], F [auth C] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N |  | ||
| GOL Query on GOL | B [auth C], C, G [auth C] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| NA Query on NA | H [auth C] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.20 ?
- R-Value Free: 0.271
- R-Value Work: 0.218
- R-Value Observed: 0.220
- Space Group: P 43 21 2
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 78.444 | ¦Á = 90 |
| b = 78.444 | ¦Â = 90 |
| c = 105.176 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data scaling |
| XDS | data reduction |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-11-20 Deposition Author(s): Whittaker, J.J., Guskov, A.
| Funding Organization | Location | Grant Number |
|---|---|---|
| German Research Foundation (DFG) | Germany | 390713860 |
Revision History (Full details and data files)
- Version 1.0: 2024-11-20
Type: Initial release
