Download MendeleyCrystal structure of nanobody MY632X bound to human serum albumin (HSA)
Ding, Y., Zhong, P.Y.To be published.
8Y9T
Crystal structure of nanobody MY6322 bound to human serum albumin (HSA)
- PDB DOI: https://doi.org/10.2210/pdb8Y9T/pdb
- Classification: PROTEIN BINDING
- Organism(s): Homo sapiens, Vicugna pacos
- Expression System: Oryza sativa, Saccharomyces cerevisiae
- Mutation(s): No
- Deposited: 2024-02-07 Released: 2025-02-12
- Funding Organization(s): National Science Foundation (NSF, China), Ministry of Science and Technology (MoST, China)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 ?
- R-Value Free: 0.324 (Depositor), 0.326 (DCC)
- R-Value Work: 0.263 (Depositor), 0.277 (DCC)
- R-Value Observed: 0.266 (Depositor)
Starting Models: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Albumin | 591 | Homo sapiens | Mutation(s): 0 Gene Names: ALB, GIG20, GIG42, PRO0903, PRO1708, PRO2044, PRO2619, PRO2675, UNQ696/PRO1341 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P02768 (Homo sapiens) Explore P02768 Go to UniProtKB: P02768 | |||||
PHAROS: P02768 GTEx: ENSG00000163631 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02768 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| nanobody MY6322 | 126 | Vicugna pacos | Mutation(s): 0 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 ?
- R-Value Free: 0.324 (Depositor), 0.326 (DCC)
- R-Value Work: 0.263 (Depositor), 0.277 (DCC)
- R-Value Observed: 0.266 (Depositor)
Space Group: C 1 2 1
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 167.951 | ¦Á = 90 |
| b = 73.699 | ¦Â = 118.74 |
| c = 86.008 | ¦Ă = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| DIALS | data scaling |
| DIALS | data reduction |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-02-12 Deposition Author(s): Ding, Y., Zhong, P.Y.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Science Foundation (NSF, China) | China | 32070939 |
| National Science Foundation (NSF, China) | China | 82030106 |
| Ministry of Science and Technology (MoST, China) | China | 2021YFA0805200 |
Revision History (Full details and data files)
- Version 1.0: 2025-02-12
Type: Initial release
