Download MendeleyQuorum Sensing Master Regulator SmcR of Photobacterium profundum
Basu Choudhury, G., Saha, A., Raychaudhuri, S., Datta, S.To be published.
8ZF3 | pdb_00008zf3
Quorum Sensing Master Regulator SmcR of Photobacterium profundum
- PDB DOI: https://doi.org/10.2210/pdb8ZF3/pdb
- Classification: TRANSCRIPTION
- Organism(s): Photobacterium profundum
- Expression System: Escherichia coli BL21
- Mutation(s): No
- Deposited: 2024-05-07 Released: 2025-05-07
- Funding Organization(s): Council of Scientific & Industrial Research (CSIR)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.78 ?
- R-Value Free: 0.231 (Depositor), 0.231 (DCC)
- R-Value Work: 0.190 (Depositor), 0.190 (DCC)
- R-Value Observed: 0.192 (Depositor)
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical OpaR | 202 | Photobacterium profundum | Mutation(s): 0 Gene Names: SMCR, PBPRA3181 |  | |
UniProt | |||||
Find proteins for Q6LMJ0 (Photobacterium profundum (strain SS9)) Explore Q6LMJ0 Go to UniProtKB: Q6LMJ0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q6LMJ0 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.78 ?
- R-Value Free: 0.231 (Depositor), 0.231 (DCC)
- R-Value Work: 0.190 (Depositor), 0.190 (DCC)
- R-Value Observed: 0.192 (Depositor)
Space Group: P 1
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 45.546 | α = 92.62 |
| b = 45.901 | β = 91.05 |
| c = 49.481 | γ = 99.94 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| PROTEUM PLUS | data reduction |
| PROTEUM PLUS | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-05-07 Deposition Author(s): Basu Choudhury, G., Saha, A., Raychaudhuri, S., Datta, S.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Council of Scientific & Industrial Research (CSIR) | India | -- |
Revision History (Full details and data files)
- Version 1.0: 2025-05-07
Type: Initial release
