Download MendeleyRoles of PiPT residues in phosphate binding and transport tested by mutagenesis
Gupta, M., Finer-Moore, J., Nelson, A., Kumar, H., Johri, A., Stroud, R.M.To be published.
9B49 | pdb_00009b49
K459Q variant of P. indica phosphate transporter
- PDB DOI: https://doi.org/10.2210/pdb9B49/pdb
- Classification: TRANSPORT PROTEIN
- Organism(s): Serendipita indica
- Expression System: Saccharomyces cerevisiae
- Mutation(s): Yes
- Membrane Protein: Yes PDBTM
- Deposited: 2024-03-20 Released: 2025-03-26
- Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.10 ?
- R-Value Free: 0.240 (Depositor), 0.249 (DCC)
- R-Value Work: 0.215 (Depositor), 0.229 (DCC)
- R-Value Observed: 0.238 (Depositor)
Starting Model: experimental
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This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Phosphate transporter | 530 | Serendipita indica | Mutation(s): 1 Membrane Entity: Yes |  | |
UniProt | |||||
Find proteins for A8N031 (Serendipita indica) Explore A8N031 Go to UniProtKB: A8N031 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A8N031 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| BNG Query on BNG | D [auth A], E [auth A], G [auth B], H [auth B] | nonyl beta-D-glucopyranoside C15 H30 O6 QFAPUKLCALRPLH-UXXRCYHCSA-N |  | ||
| PO4 Query on PO4 | C [auth A], F [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.10 ?
- R-Value Free: 0.240 (Depositor), 0.249 (DCC)
- R-Value Work: 0.215 (Depositor), 0.229 (DCC)
- R-Value Observed: 0.238 (Depositor)
Space Group: H 3
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 173.67 | ¦Á = 90 |
| b = 173.67 | ¦Â = 90 |
| c = 172.07 | ¦Ă = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| XSCALE | data scaling |
| PHENIX | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-03-26 Deposition Author(s): Gupta, M., Finer-Moore, J., Stroud, R.M.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R01 GM24485 |
Revision History (Full details and data files)
- Version 1.0: 2025-03-26
Type: Initial release
