Download MendeleyYqiA, Klebsiella pneumoniae serine hydrolase, unbound
Randall, G.T., Fellner, M.To be published.
9BI7 | pdb_00009bi7
YqiA, Klebsiella pneumoniae serine hydrolase, unbound
- PDB DOI: https://doi.org/10.2210/pdb9BI7/pdb
- Classification: HYDROLASE
- Organism(s): Klebsiella pneumoniae
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2024-04-22 Released: 2025-05-07
- Funding Organization(s): MBIE China-MWC Collaboration
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 ?
- R-Value Free: 0.213 (Depositor), 0.212 (DCC)
- R-Value Work: 0.175 (Depositor), 0.173 (DCC)
- R-Value Observed: 0.177 (Depositor)
Starting Model: in silico
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wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Esterase | 194 | Klebsiella pneumoniae | Mutation(s): 0 Gene Names: yqiA, B5L96_16095, B6I68_11455, BANRA_00684, BB784_03840, BL124_00019630, CK244_014295, DL426_23790, DW281_23375, EAO17_10155... |  | |
UniProt | |||||
Find proteins for A0A0W8AWE3 (Klebsiella pneumoniae) Explore A0A0W8AWE3 Go to UniProtKB: A0A0W8AWE3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0W8AWE3 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CA Query on CA | B [auth A], C [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | ||
| CL Query on CL | D [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.50 ?
- R-Value Free: 0.213 (Depositor), 0.212 (DCC)
- R-Value Work: 0.175 (Depositor), 0.173 (DCC)
- R-Value Observed: 0.177 (Depositor)
Space Group: P 32 2 1
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 62.459 | α = 90 |
| b = 62.459 | β = 90 |
| c = 80.361 | γ = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| Aimless | data scaling |
| XDS | data reduction |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-05-07 Deposition Author(s): Randall, G.T., Fellner, M.
| Funding Organization | Location | Grant Number |
|---|---|---|
| MBIE China-MWC Collaboration | New Zealand | Nr.3720870 |
Revision History (Full details and data files)
- Version 1.0: 2025-05-07
Type: Initial release
