9EOL

Deposited: 2024-03-15 Released: 2025-02-19
Deposition Author(s): McNae, I.W., Abrahams, J.P., Li, C.
Funding Organization(s): Chinese Scholarship Council, Netherlands Organisation for Scientific Research (NWO)

Experimental Data Snapshot

Starting Model: in silico
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wwPDB Validation 3D Report Full Report

Ligand Structure Quality Assessment

This is version 1.0 of the entry. See complete history.

Literature

(2024) bioRxiv

Macromolecule Content

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
UPF0309 protein SCO4393	A, B	251	Streptomyces coelicolor	Mutation(s): 0 Gene Names: SCO4393, SCD10.25c
UniProt
Find proteins for Q9K3V1 (Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)) Explore Q9K3V1 Go to UniProtKB: Q9K3V1
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9K3V1
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
6PG (Subject of Investigation/LOI) Query on 6PG Download Ideal Coordinates CCD File SDF format, chain D [auth A] SDF format, chain F [auth B] MOL2 format, chain D [auth A] MOL2 format, chain F [auth B] mmCIF format, chain D [auth A] mmCIF format, chain F [auth B]	D [auth A], F [auth B]	6-PHOSPHOGLUCONIC ACID C₆ H₁₃ O₁₀ P BIRSGZKFKXLSJQ-SQOUGZDYSA-N		Interactions Focus chain D [auth A] Focus chain F [auth B] Interactions & Density Focus chain D [auth A] Focus chain F [auth B]
SO4 Query on SO4 Download Ideal Coordinates CCD File SDF format, chain C [auth A] SDF format, chain E [auth B] MOL2 format, chain C [auth A] MOL2 format, chain E [auth B] mmCIF format, chain C [auth A] mmCIF format, chain E [auth B]	C [auth A], E [auth B]	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Interactions Focus chain C [auth A] Focus chain E [auth B] Interactions & Density Focus chain C [auth A] Focus chain E [auth B]