Ligand validation:4Y28

LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE

LHG is a Ligand Of Interest in 4Y28 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4Y28_LHG_A_7001	71%	46%	0.128	0.949	0.96	1.13	2	4	7	0	100%	1
4Y28_LHG_1_1801	52%	45%	0.167	0.925	0.91	1.2	2	5	8	0	100%	1
4Y28_LHG_A_5003	42%	43%	0.156	0.909	1.04	1.18	2	4	5	0	82%	0.8163
4Y28_LHG_B_5004	34%	28%	0.114	0.899	1.34	1.53	2	3	1	0	43%	0.4286
4Y28_LHG_2_2801	32%	36%	0.145	0.908	1.32	1.21	2	4	4	0	49%	0.4898
5L8R_LHG_A_853	86%	62%	0.097	0.964	0.4	1.04	-	3	3	0	100%	1
4XK8_LHG_a_847	85%	48%	0.087	0.952	0.93	1.06	2	3	0	0	100%	1
4RKU_LHG_A_7003	42%	48%	0.154	0.871	0.96	1.04	3	3	14	0	100%	1
6ZXS_LHG_A_848	39%	62%	0.227	0.937	0.38	1.04	-	3	8	0	100%	1
7DKZ_LHG_B_801	39%	43%	0.134	0.937	1.09	1.1	2	2	1	0	47%	0.4694
5GTI_LHG_L_101	99%	46%	0.045	0.971	0.91	1.17	2	4	0	0	100%	1
5V2C_LHG_l_101	98%	46%	0.068	0.987	0.91	1.18	2	3	0	0	100%	1
5WS6_LHG_d_407	96%	54%	0.063	0.973	0.89	0.9	2	3	0	0	100%	1
5B5E_LHG_D_410	94%	49%	0.068	0.967	0.83	1.13	2	2	0	0	100%	1
7RF1_LHG_D_410	91%	47%	0.087	0.974	0.92	1.14	2	5	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.