Ligand validation:4Y28

LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE

LMG is a Ligand Of Interest in 4Y28 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4Y28_LMG_J_5001	45%	40%	0.166	0.898	0.88	1.44	2	7	7	0	100%	1
4Y28_LMG_4_4801	26%	32%	0.185	0.889	1.04	1.63	2	10	4	0	64%	0.6364
4Y28_LMG_F_5001	24%	26%	0.105	0.835	1.24	1.72	3	6	7	0	42%	0.4182
4Y28_LMG_2_2802	22%	38%	0.171	0.852	1.08	1.33	2	7	5	0	64%	0.6364
4Y28_LMG_G_2021	20%	45%	0.187	0.835	0.95	1.16	2	5	19	0	75%	0.7455
4Y28_LMG_F_5002	20%	40%	0.128	0.785	1.07	1.27	2	5	5	0	67%	0.6727
4Y28_LMG_B_5005	4%	45%	0.204	0.626	1.08	1.04	2	3	3	0	69%	0.6909
5L8R_LMG_F_304	52%	47%	0.109	0.893	0.97	1.09	4	2	7	0	85%	0.8545
7DKZ_LMG_4_319	38%	40%	0.201	0.919	0.88	1.46	3	8	0	0	91%	0.9091
6ZXS_LMG_F_306	29%	46%	0.234	0.917	0.97	1.11	3	4	4	0	85%	0.8545
4RKU_LMG_J_5001	23%	42%	0.144	0.833	1.12	1.12	2	2	3	0	64%	0.6364
5GTI_LMG_m_101	91%	46%	0.054	0.954	0.89	1.17	2	6	0	0	93%	0.9273
5V2C_LMG_B_621	91%	30%	0.074	0.972	1.09	1.67	4	8	0	0	93%	0.9273
5WS6_LMG_j_101	84%	48%	0.077	0.952	0.88	1.13	2	5	0	0	93%	0.9273
7YQ2_LMG_d_412	79%	54%	0.098	0.955	0.9	0.89	2	3	0	0	93%	0.9273
5B5E_LMG_j_101	74%	44%	0.102	0.946	0.98	1.16	4	7	0	0	93%	0.9273

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.