Announcement: Search API v2 will be released April 13

03/16

Users should migrate to this new Search API. Please contact us with any questions.

Starting April 13, Version 2 of the RCSB PDB Search API will be available to better support access to RCSB PDB features. Version 1 of the API will be deprecated on this date; queries using this version will not be supported.

Programmatic users are encouraged to use a preview server at search-beta.rcsb.org to review any code changes needed before v2 is released.

Documentation is available to help developers migrate from v1 to v2.

News Index

• 12/31 Molecular Landscapes for 2023

• 12/22 Season's Greetings

• 12/20 Celebrate #NationalCrosswordDay with Sequence Events

• 12/18 Using KBase to access PDB Structures and CSMs

• 12/15 Guide to Understanding PDB Data: Hierarchical Structure

• 12/15 wwPDB News: PDB Certified as a Global Core Biodata Resource

• 12/13 Find Similarly-Shaped Structures with Advanced Search

• 12/13 Exploring the Structural Biology of Cancer

• 12/08 Structural Biology and Nobel Prizes

• 12/06 Molecular Origami: Green and Red Fluorescent Proteins

• 12/04 Explore Multiple Sequence Alignments in 1D and 3D

• 11/30 Video: How Neurons Communicate

• 11/29 Ligand Expo: Scheduled downtime and request for feedback

• 11/22 Keeping Up with RCSB PDB News

• 11/21 Molecular Landscapes

• 11/15 Education Corner: Animating Photosynthesis

• 11/07 Meet RCSB PDB at ABRCMS

• 11/04 New Coloring Page: Clathrin-coated Pit

• 11/01 Molecular Landscapes

• 11/01 wwPDB News: Deprecation of FTP File Download Protocol in the PDB Archive

• 10/25 Meet RCSB PDB at SACNAS

• 10/21 Register Now for Virtual Crash Course: Using KBase to access PDB Structures and CSMs

• 10/19 Happy Birthday, PDB!

• 10/17 Remembering John Westbrook on the Anniversary of His Passing

• 10/16 Happy Birthday, Irving Geis

• 10/13 Education Corner: Inktober SciArt

• 10/12 wwPDB News: wwPDB Charter: Full and Associate Members

• 10/10 Fall Newsletter Published

• 10/07 Undergrads/Grads: Apply to the Molecule of the Month Boot Camp (January 2023)

• 10/01 Structural Biology and Nobel Prizes

• 09/27 Molecular Origami: Build a 3D paper model of DNA

• 09/26 wwPDB News: Improved EM validation with Q-score

• 09/20 View Crystal Structure Quality in 3D

• 09/13 Simple Sequence Searching

• 09/07 Register Now for Virtual Crash Course: Exploring Computed Structure Models from Artificial Intelligence/Machine Learning at RCSB.org

• 09/05 wwPDB News: Future Planning: PDB entries with extended CCD or PDB IDs will be distributed in the PDBx/mmCIF format only

• 08/31 Explore Computed Structure Models Alongside PDB Data

• 08/29 Education Corner: Bound! Protein-Drug Card Game

• 08/23 Molecular Landscapes: E. coli

• 08/22 DNS name changes for PDB archive downloads from RCSB PDB

• 08/16 Chemical Sketch Tool

• 08/09 Poster Prize Awarded at ACA

• 08/01 Congratulations to David S. Goodsell

• 07/31 New Coloring Page

• 07/26 Meet the RCSB PDB at ACA

• 07/25 wwPDB News: Improved EM validation with Q-score

• 07/19 Poster Prize Awarded at ISMB

• 07/12 Summer Newsletter Published

• 07/12 New Position: Senior Front-end Web Developer

• 07/10 Meet the RCSB PDB at ISMB

• 07/08 Congratulations to David S. Goodsell

• 07/05 Meet the RCSB PDB at The Protein Society

• 06/28 wwPDB News: New Publication: PDBx/mmCIF Ecosystem

• 06/21 Education Corner: Python Scripting for Biochemistry & Molecular Biology

• 06/20 Developers: Switch to Search API v2 Before July 13

• 06/14 Learn to Use Mol* for 3D Visualization

• 06/06 PDB Data Distributions

• 06/06 New Flyer: Poxviruses

• 06/01 Play the Bound! Protein-Drug Card Game

• 05/24 Watch PDB50 Celebrations

• 05/23 Subscribe to API News

• 05/17 Award-Winning Videos on Molecular Mechanisms of Cancer

• 05/16 Postdocs and Scientific Software Developers

• 05/10 Curated Files for 3D Printing

• 05/09 New Ways to Explore Similar Proteins

• 05/03 wwPDB News: Distributing PDBx/mmCIF-Formatted Assembly Files

• 05/03 Vote Now for the Viewer's Choice Award

• 04/26 New Access to the PDB archive

• 04/25 Explore Ligand Quality

• 04/22 Videos of Experimental Methods

• 04/19 Access Membrane Protein Annotations

• 04/19 Spring Newsletter Published

• 04/15 High School Students: Submit Videos By April 25

• 04/13 Search API v2 Now Available

• 04/12 Paper Published: Evolution of the SARS-CoV-2 proteome in 3D

• 04/04 Developers: Switch to New Sequence Cluster Files by April 12

• 03/31 New Coloring Pages

• 03/28 Meet RCSB PDB at ASBMB

• 03/25 CASP15 Call for Targets

• 03/24 Annual Report Published

• 03/22 Intrinsically Disordered Biological Macromolecules in Cellular Signaling/Regulation

• 03/18 wwPDB News: ModelCIF Extension for Computed Structure Models

• 03/17 Video: Opioids and Pain Signaling

• 03/16 Announcement: Search API v2 will be released April 13

• 03/15 Brain Awareness Week

• 03/15 Explore Antibody Annotations

• 03/14 Award-Winning Images

• 03/08 Streamline Search Results

• 03/08 Register for Exploring Structural Database Use in Crystallography

• 03/01 Search for Structures or Feature Help, News, and PDB-101

• 03/01 Molecular Landscapes in The New Yorker

• 02/25 wwPDB News: Deposition of Half-maps for Certain EM Entries Now Mandatory

• 02/22 Improved Access to Chemical Component Definitions

• 02/22 Molecule of the Month Newsletter

• 02/15 Molecular Landscapes

• 02/11 Developers: Switch to New Sequence Cluster Files by April 12

• 02/11 Molecular Valentines

• 02/08 Education Corner: Inktober SciArt

• 02/08 Distributing PDBx/mmCIF-Formatted Assembly Files

• 02/01 Browse and Explore ECOD Annotations

• 02/01 Register Now for Crash Course: Python Scripting for Biochemistry & Molecular Biology

• 01/25 MyPDB: Keep up-to-date with New Structures

• 01/25 New Publications in Protein Science

• 01/18 wwPDB News: Improved support for extended PDBx/mmCIF structure factor files

• 01/18 New Publication in Structure

• 01/12 Winter Newsletter Published

• 01/05 wwPDB News: Time-stamped Copies of PDB and EMDB Archives

• 01/01 2022: Revolutionizing Structural Biology with 3DEM