Download MendeleyCrystal structure of Ser/Thr kinase Pim1 in complex with thioridazine
Zhang, W., Wan, X., Li, W., Xie, Y., Huang, N.To be published.
4IAA
Crystal structure of Ser/Thr kinase Pim1 in complex with thioridazine
- PDB DOI: https://doi.org/10.2210/pdb4IAA/pdb
- Classification: TRANSFERASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2012-12-06 Released: 2013-12-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.85 ?
- R-Value Free: 0.231
- R-Value Work: 0.185
- R-Value Observed: 0.187
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Serine/threonine-protein kinase pim-1 | 289 | Homo sapiens | Mutation(s): 0 Gene Names: PIM1 EC: 2.7.11.1 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P11309 (Homo sapiens) Explore P11309 Go to UniProtKB: P11309 | |||||
PHAROS: P11309 GTEx: ENSG00000137193 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P11309 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| RTZ Query on RTZ | B [auth A] | 10-{2-[(2R)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine C21 H26 N2 S2 KLBQZWRITKRQQV-MRXNPFEDSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| SEP Query on SEP | A | L-PEPTIDE LINKING | C3 H8 N O6 P |  | SER |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.85 ?
- R-Value Free: 0.231
- R-Value Work: 0.185
- R-Value Observed: 0.187
- Space Group: P 65
Unit Cell:
| Length ( ? ) | Angle ( ? ) |
|---|---|
| a = 98.817 | ¦Á = 90 |
| b = 98.817 | ¦Â = 90 |
| c = 80.507 | ¦Ă = 120 |
| Software Name | Purpose |
|---|---|
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| CrystalClear | data collection |
| DENZO | data reduction |
| PHASER | phasing |
Entry History
Deposition Data
Revision History (Full details and data files)
- Version 1.0: 2013-12-18
Type: Initial release - Version 1.1: 2024-11-06
Changes: Data collection, Database references, Derived calculations, Structure summary
