Preview New 3D Similarity Tab

03/13

The 3D Similarity tab provides pre-calculated systematic structure comparisons for all PDB proteins. A new version of this feature, available this spring, will be based on domain-split alignments. The new 3D Similarity tab can be previewed at beta.rcsb.org. For an example, see the 3D Similarity tab for PDB entry 3BMV.

When this feature is released to the production site, whole chain comparisons will be discontinued from the 3D Similarity tab.

The Comparison Tool will continue to support whole protein chains comparisons, in addition to domain comparisons.

News Index

• 12/25 Happy Holidays

• 12/18 Join the RCSB PDB Team

• 12/18 Papers Published

• 12/11 Announcement: Meeting on Hybrid Methods

• 12/11 Map PDB Structures to Full-length Protein Sequences

• 12/04 Advanced Search: Multiple ID Search

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• 11/13 Ligand Searching

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• 10/16 Nobel Prize Awarded for studies of G-protein-coupled receptors

• 10/16 Explore the Structural Biology of HIV

• 10/09 Fall Newsletter Published

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• 09/11 Poster Prize Awarded at ECM

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• 08/28 Smart Searching with the Top Bar Suggestion Box

• 08/21 Download RCSB PDB Mobile for the iPhone/iPad

• 08/21 Poster Prize Awarded at ACA

• 08/14 Poster Prize Awarded at ISMB

• 08/14 Improved Ligand Reports

• 08/07 Build complex queries with Advanced Search

• 07/31 Prepare data for deposition with pdb_extract and SF-Tool

• 07/31 Protein Society Annual Symposium

• 07/24 Upcoming Meeting: ACA

• 07/17 Different Ways To Explore New Entries

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• 06/26 Latest Website Release

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• 06/19 National Protein Modeling Champions

• 06/12 Top Bar SMILES String Searching

• 06/05 Molecule of the Month reaches 150

• 05/29 Tour the PDB with Drill-down Pie Charts

• 05/22 Domain-based Structural Alignments

• 05/15 New Poster: Virus Structures

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• 05/08 Customized Home Page: Sequence Search

• 05/01 Latest Website Release

• 04/24 Rutgers Day (April 28)

• 04/24 Create a Collage of Structures

• 04/17 DNA Day 2012: April 20

• 04/17 Exhibiting at Experimental Biology

• 04/10 Spring Newsletter Published

• 04/03 Depositing Structures with Ligands

• 03/27 Browse the PDB by GO Terms, EC Number, Source Organism, and More

• 03/20 Visit the San Diego Festival of Science and Engineering on March 24

• 03/20 J.P. Stevens HS Wins NJ Protein Modeling Event

• 03/13 Sound Science

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• 03/13 Preview New 3D Similarity Tab

• 03/06 Explore a Structural View of Biology at PDB-101

• 02/28 Visualize Molecular Surfaces with Protein Workshop

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• 02/14 Ligand Summary Pages

• 02/07 Free Webinar and Updated Tutorial

• 02/07 Volunteer Structures For Foldit

• 01/31 Announcement: Meeting on Hybrid Methods

• 01/31 Free Webinar on How to use the RCSB PDB

• 01/24 Newsletter Published

• 01/17 NJ Science Olympiad Protein Modeling Results

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• 01/03 Annual Report Published